Draftedgraph v0.4 · steps coded from the full text of the success set · success score v0 · not yet discussed
For each paper: where it starts, every step the authors took with the node and the mode it belongs to, where it ends, and its success profile.
Map. Rust: the node where the paper enters. Teal: nodes it visits. Grey: nodes it never uses.
Strip. The steps in order. → a step along an edge the graph draws (or a repeat of the same node). ⇢ a jump the graph reaches only through other nodes.
Table. One row per step: the node, the mode of inquiry the step belongs to, what the authors did, and the page. Read the table against the paper.
Each node’s letter is the first letter of its verb: N new capability · E explore: establish the phenomenon · O observe · I infer a latent quantity (estimate) · Q question · H hypothesize · S simulate or derive the expectations · D design the test · F find or set the conditions · C compare · V vary and replicate · X exclude · K keep the claim · P protect · R refine. The crosswalk maps each node to the modes it serves.
One reader (coder 1, a Claude subagent, codebook v0) coded each paper, from the text alone; two blind model coders recoded them on October 25, 2026 (see “What the walks cannot show”). The order is the order of the paper’s account, which may not be the order of the work. Full codings: private/analysis/success-set/. Slides: three of these walks.
Is the graph right? What these eight say
Test of graph v0.4
Result on the eight papers
Every move can be placed on a node
Yes: no coder needed a node outside v0.4
Transitions follow edges the graph draws
24 of 83 transitions between the 91 steps (29%); the rest are jumps
The textbook route Q → H → S → D → F → O → C is walked
Never
D, a discriminating test designed before the data
1 of 8 papers
H, stated rival hypotheses
5 of 8 papers
Entry at a node other than Q or H
7 of 8 papers
The node set holds; the edges do not. Most science moves between nodes in ways the graph draws only as long detours.
The most frequent jumps: V ⇢ C in 4 papers; S ⇢ C in 4 papers; C ⇢ P in 3 papers; C ⇢ K in 3 papers; X ⇢ V in 2 papers. S ⇢ C is a derivation compared with data already in hand; C ⇢ X and C ⇢ K are verdicts without a control series, which found conditions force.
Next tests. The same coding on the 24 matched controls and on unsuccessful papers. If ordinary and failed papers walk the same routes, the route does not explain success; if they skip different nodes, the graph has found something.
Candidate changes for v0.5: draw S → C and C → X, K as edges; or make the graph two-level, modes as the outer graph and the hypothesis pass as one mode’s inner loop. The room decides.
The success score (v0)
Four dimensions, each scored from 0 to 1 against comparable work, then combined. No measure here is settled; the score is a scaffold the group replaces piece by piece.
Dimension
v0 measure
Compared against
Status
Impact
Citation percentile
All research articles in the same journal, year, and OpenAlex subfield
Measured
Breadth (polymathy)
Mean of two ranks: share of citers outside geoscience; share of references outside geoscience
The group’s blinded rating on the advance profile, rescaled to 0–1
Not yet rated
Pending
Macro score. The geometric mean of the measured dimensions, each floored at 0.05. A geometric mean does not let a high score on one dimension buy back a near-zero on another, which is what “success on all four” means (OECD et al. 2008). The arithmetic mean is reported beside it as a sensitivity check.
What the v0 scores can and cannot say. The recognized four score high because they were chosen on citations. The designated four have 1 to 25 citers each, so their breadth and novelty ranks are noise. The weak novelty proxy sinks Gräff and Xu.
Shapiro et al. (2005): noise becomes a seismometer
Start. A new capability: Green functions recovered from ambient noise, plus the new USArray stations (p. 1615). Enters the graph at N (New capability). (Shapiro et al. 2005)
End. K, a capability claim: noise correlations carry shallow and middle crustal structure, mapped at 60–100 km resolution (p. 1617).
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flowchart LR
E["<b>E</b>"] --> Q["<b>Q</b>"]
Q --> H["<b>H</b>"]
H --> S["<b>S</b>"]
S --> D["<b>D</b>"]
D --> F["<b>F</b>"]
F --> O["<b>O</b>"]
O --> I["<b>I</b>"]
O --> C{"<b>C</b>"}
I --> C
C --> V["<b>V</b>"]
V --> F
V --> X["<b>X</b>"]
V --> K["<b>K</b>"]
X -.-> P["<b>P</b>"]
P -.-> S
X --> R["<b>R</b>"]
K --> R
R --> H
C -.-> E
O -.-> E
N["<b>N</b>"] --> O
E -.-> N
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classDef entry fill:#f6e0d4,stroke:#a1512b,stroke-width:4px,color:#5a2e17;
classDef off fill:#f3f3f1,stroke:#d3d9db,stroke-width:1px,color:#b3bcbf;
class C,E,F,I,K,O,V on;
class N entry;
class D,H,P,Q,R,S,X off;
Figure 1: Graph v0.4 as visited by Shapiro et al. (2005). Rust: entry node N. Teal: visited. Grey: never used (D, H, P, Q, R, S, X).
1NNew capability→2NNew capability⇢3EExplore⇢4VVary and replicate→5FFind conditions→6OObserve→7IInfer⇢8VVary and replicate⇢9CCompare⇢10KKeep
#
Node
Mode
What the authors did
Page
1
N New capability
Methods
Correlating a random wavefield gives the Green function between two receivers, after acoustics and helioseismology
1615
2
N New capability
Methods
One-bit correlation to suppress anisotropic noise and earthquake signals
1616
3
E Explore
Robustness
Four separate months of 2002 give similar waveforms, distinct between station pairs
1616
4
V Vary and replicate
Robustness
Noise correlations match earthquake Rayleigh waves on the same paths; one month suffices
1616
5
F Find conditions
Observation
Thirty quiet days (no event above M5.8), August–September 2004, 62 stations
1616
6
O Observe
Observation
1,891 station-pair paths at one sample per second
1616
7
I Infer
Estimation
Group speeds by frequency–time analysis (678 and 891 at 7.5 and 15 s), inverted on a 28 km grid
1616
8
V Vary and replicate
Replication
A second month gives similar maps
1617
9
C Compare
Observation
Slow basins, fast plutonic ranges, the San Andreas contrast, against the geological map
1617
10
K Keep
Methods
Noise correlations retained as a tomographic capability
Sun and Davis (2026): boreholes feel the megathrust lock
Start. An unsolved problem: offshore secular strain is hard to measure (p. 1), met with borehole observatories installed on drilling expeditions between 1995 and 2010 (p. 8). Enters the graph at N (New capability). (Sun and Davis 2026)
End. K then R: strain rates of 0.097–0.686 ×10⁻⁶/yr and full shallow locking at northern Cascadia (pp. 4, 7–8); Barbados left unmodeled (p. 8).
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flowchart LR
E["<b>E</b>"] --> Q["<b>Q</b>"]
Q --> H["<b>H</b>"]
H --> S["<b>S</b>"]
S --> D["<b>D</b>"]
D --> F["<b>F</b>"]
F --> O["<b>O</b>"]
O --> I["<b>I</b>"]
O --> C{"<b>C</b>"}
I --> C
C --> V["<b>V</b>"]
V --> F
V --> X["<b>X</b>"]
V --> K["<b>K</b>"]
X -.-> P["<b>P</b>"]
P -.-> S
X --> R["<b>R</b>"]
K --> R
R --> H
C -.-> E
O -.-> E
N["<b>N</b>"] --> O
E -.-> N
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classDef off fill:#f3f3f1,stroke:#d3d9db,stroke-width:1px,color:#b3bcbf;
class C,E,H,I,K,O,Q,R,S,V,X on;
class N entry;
class D,F,P off;
Figure 2: Graph v0.4 as visited by Sun and Davis (2026). Rust: entry node N. Teal: visited. Grey: never used (D, F, P).
1NNew capability→2OObserve→3EExplore⇢4HHypothesize⇢5XExclude⇢6IInfer⇢7QQuestion⇢8SSimulate or derive⇢9VVary and replicate⇢10CCompare⇢11XExclude⇢12KKeep→13RRefine
#
Node
Mode
What the authors did
Page
1
N New capability
Instruments
Borehole observatories with quartz pressure sensors; drift from sensor creep and aging characterized
1–3, 9
2
O Observe
Observation
Multiyear formation and seafloor pressure at four holes on four margins
2
3
E Explore
Observation
All four show “rising secular Pf trends greater than instrumental drift”
4
4
H Hypothesize
Hypothesis
Rivals to tectonic strain: drift, consolidation, compaction, post-drilling recovery, leakage
3–5, 8
5
X Exclude
Robustness
Drift excluded by a seafloor reference, an accidental open-ocean test, and calibrations; drainage too slow
3–5, 9
6
I Infer
Estimation
Pressure rate to strain rate by undrained poroelasticity, 4.21–6.79 kPa per microstrain
3, 10
7
Q Question
Theory
Which along-dip locking gives the observed sign and rate?
5–6
8
S Simulate or derive
Simulation
Finite-element backslip models: at least 90% locking at the trench needed for contraction
5
9
V Vary and replicate
Robustness
Rigidity, elastic mantle, weak asthenosphere, and locked width varied
5–6
10
C Compare
Theory
Cascadia models give 0.08–0.15 against 0.146 ×10⁻⁶/yr observed
7
11
X Exclude
Hypothesis
Ten percent or more shallow creep “would result in dilatational strain … counter to the observation”
7
12
K Keep
Estimation
Strain rates; full shallow locking at northern Cascadia, inter-slow-slip locking at Costa Rica
7–8
13
R Refine
Synthesis
Barbados left unmodeled; post-drilling recovery not excluded there
Normandeau et al. (2025): the seafloor freezes and thaws
Start. An anomaly between repeat surveys: hundreds of small mounds in July 2023, absent shallower than 25 m in 2021 (p. 4). Enters the graph at O (Observe). (Normandeau et al. 2025)
End. K, best explanation by analogy: seasonal freeze–thaw of freshened porewater expands and contracts the seafloor (pp. 1, 9–11).
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flowchart LR
E["<b>E</b>"] --> Q["<b>Q</b>"]
Q --> H["<b>H</b>"]
H --> S["<b>S</b>"]
S --> D["<b>D</b>"]
D --> F["<b>F</b>"]
F --> O["<b>O</b>"]
O --> I["<b>I</b>"]
O --> C{"<b>C</b>"}
I --> C
C --> V["<b>V</b>"]
V --> F
V --> X["<b>X</b>"]
V --> K["<b>K</b>"]
X -.-> P["<b>P</b>"]
P -.-> S
X --> R["<b>R</b>"]
K --> R
R --> H
C -.-> E
O -.-> E
N["<b>N</b>"] --> O
E -.-> N
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classDef entry fill:#f6e0d4,stroke:#a1512b,stroke-width:4px,color:#5a2e17;
classDef off fill:#f3f3f1,stroke:#d3d9db,stroke-width:1px,color:#b3bcbf;
class C,E,H,I,K,P,S on;
class O entry;
class D,F,N,Q,R,V,X off;
Figure 3: Graph v0.4 as visited by Normandeau et al. (2025). Rust: entry node O. Teal: visited. Grey: never used (D, F, N, Q, R, V, X).
1OObserve→2EExplore⇢3HHypothesize⇢4IInfer⇢5SSimulate or derive⇢6CCompare⇢7PProtect⇢8KKeep
#
Node
Mode
What the authors did
Page
1
O Observe
Observation
Multibeam, backscatter, subbottom profiles, 13 cores, porewater, moorings; surveys 2021, July 2023, November 2023, August 2024
3–5, 12
2
E Explore
Observation
Blisters about 5 m wide present in July 2023, “greatly diminished” in November, back in August 2024
4
3
H Hypothesize
Hypothesis
Pockmarks from groundwater, gas, or burrowing; frost blisters against all-ice icing blisters
3–11
4
I Infer
Estimation
Water temperature at 30 m inferred from a 60 m mooring after the 30 m mooring was lost
6, 12
5
S Simulate or derive
Theory
Stefan equation: freezing depth 0.32–0.70 m
10
6
C Compare
Theory
Freezing depth matches the frost base at about 40 cm; ice expansion gives at most 0.05 m against 0.2 m of relief
10
7
P Protect
Hypothesis
“The underlying ground ice that forms the blisters may exist over multiple years”
10
8
K Keep
Synthesis
Seasonal freeze–thaw retained, by analogy with frost blisters on land
Vine and Matthews (1963): reversed blocks and spreading
Start. An unsolved problem: magnetic anomalies over ridges that no model of uniform magnetization explains (p. 947). Enters the graph at E (Explore). (Vine and Matthews 1963)
End. K, best explanation: reversed blocks from spreading under a reversing field, “more plausible” than the alternative (p. 949).
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flowchart LR
E["<b>E</b>"] --> Q["<b>Q</b>"]
Q --> H["<b>H</b>"]
H --> S["<b>S</b>"]
S --> D["<b>D</b>"]
D --> F["<b>F</b>"]
F --> O["<b>O</b>"]
O --> I["<b>I</b>"]
O --> C{"<b>C</b>"}
I --> C
C --> V["<b>V</b>"]
V --> F
V --> X["<b>X</b>"]
V --> K["<b>K</b>"]
X -.-> P["<b>P</b>"]
P -.-> S
X --> R["<b>R</b>"]
K --> R
R --> H
C -.-> E
O -.-> E
N["<b>N</b>"] --> O
E -.-> N
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classDef off fill:#f3f3f1,stroke:#d3d9db,stroke-width:1px,color:#b3bcbf;
class C,H,I,K,O,P,Q,S,V,X on;
class E entry;
class D,F,N,R off;
Figure 4: Graph v0.4 as visited by Vine and Matthews (1963). Rust: entry node E. Teal: visited. Grey: never used (D, F, N, R).
1EExplore→2QQuestion⇢3OObserve→4IInfer→5CCompare⇢6PProtect→7SSimulate or derive⇢8XExclude⇢9HHypothesize⇢10KKeep⇢11HHypothesize→12SSimulate or derive⇢13CCompare→14VVary and replicate⇢15PProtect⇢16XExclude⇢17KKeep
#
Node
Mode
What the authors did
Page
1
E Explore
Observation
A three-category anomaly pattern over ridges in three oceans, from earlier surveys
947
2
Q Question
Observation
Why do the central and long-period anomalies exist?
947
3
O Observe
Observation
H.M.S. Owen survey of the Carlsberg Ridge, November 1962
947
4
I Infer
Estimation
Computer best-fit magnetization of two seamounts
947
5
C Compare
Estimation
The reversed case fits well; the normal case poorly
947
6
P Protect
Hypothesis
The poor normal fit blamed on adjacent topography and weak contour control
947
7
S Simulate or derive
Simulation
Forward profiles across three cross-ridge lines for uniform normal magnetization
948
8
X Exclude
Hypothesis
The uniform model bears “little resemblance to the observed profiles”
948
9
H Hypothesize
Theory
Crust in blocks about 20 km wide, alternately normal and reversed
948
10
K Keep
Theory
“Some 50 per cent of the oceanic crust might be reversely magnetized”
948
11
H Hypothesize
Synthesis
The model as “virtually a corollary of” seafloor spreading plus field reversals
948
12
S Simulate or derive
Simulation
Forward models for the Pacific, the Mid-Atlantic, and the Carlsberg Ridge
948
13
C Compare
Simulation
“The essential form of the anomalies is readily achieved”
949
14
V Vary and replicate
Synthesis
Independent traces: Iceland lavas, reversed basalt in the preliminary Mohole
Rodell et al. (2009): groundwater loss seen from space
Start. An unsolved problem: “there has been no regional assessment of the rate of groundwater depletion” in northwest India (p. 999). Enters the graph at Q (Question). (Rodell et al. 2009)
End. K, an estimate with an explanation: 4.0 ± 1.0 cm/yr, 109 km³ lost, human use the likely cause (p. 1001); then a comparison with the ministry figure.
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flowchart LR
E["<b>E</b>"] --> Q["<b>Q</b>"]
Q --> H["<b>H</b>"]
H --> S["<b>S</b>"]
S --> D["<b>D</b>"]
D --> F["<b>F</b>"]
F --> O["<b>O</b>"]
O --> I["<b>I</b>"]
O --> C{"<b>C</b>"}
I --> C
C --> V["<b>V</b>"]
V --> F
V --> X["<b>X</b>"]
V --> K["<b>K</b>"]
X -.-> P["<b>P</b>"]
P -.-> S
X --> R["<b>R</b>"]
K --> R
R --> H
C -.-> E
O -.-> E
N["<b>N</b>"] --> O
E -.-> N
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classDef entry fill:#f6e0d4,stroke:#a1512b,stroke-width:4px,color:#5a2e17;
classDef off fill:#f3f3f1,stroke:#d3d9db,stroke-width:1px,color:#b3bcbf;
class C,H,I,K,N,O,S,V,X on;
class Q entry;
class D,E,F,P,R off;
Figure 5: Graph v0.4 as visited by Rodell et al. (2009). Rust: entry node Q. Teal: visited. Grey: never used (D, E, F, P, R).
1QQuestion⇢2NNew capability→3OObserve→4IInfer⇢5HHypothesize→6SSimulate or derive⇢7XExclude⇢8VVary and replicate→9KKeep⇢10CCompare
#
Node
Mode
What the authors did
Page
1
Q Question
Estimation
Rate of groundwater depletion over Rajasthan, Punjab, and Haryana with Delhi, August 2002 to October 2008
999
2
N New capability
Instruments
73 monthly GRACE solutions, destriped; smoothing radius tested; scaling 1.95 from a synthetic signal
1001, M5
3
O Observe
Observation
GRACE water-storage series for the region
1000
4
I Infer
Estimation
Groundwater as storage minus the mean of five modeled soil-water runs; error budget 1.0 cm/yr
1001
5
H Hypothesize
Hypothesis
Rivals: soil moisture, surface water, snow, glaciers, biomass; natural variability against human use
1000–1001
6
S Simulate or derive
Simulation
Expected leakage from Himalayan melt and from surrounding trends
1000
7
X Exclude
Hypothesis
Glaciers at most 15%, reservoirs, paddies, snow excluded; soil water 0.4 cm/yr; rainfall near normal
1000–1001
8
V Vary and replicate
Robustness
Seasonal lags match earlier studies; smoothing radius makes insignificant differences
1001, M5
9
K Keep
Estimation
4.0 ± 1.0 cm/yr retained; human consumption the likely cause
Start. A new capability: machine learning, 39 years of reanalysis, and compute; a benchmark set by others (p. 1). Enters the graph at N (New capability). (Lam et al. 2023)
End. K, forecast skill: better than the operational system on 90% of 1,380 targets, deterministic, 10 days, 0.25° (pp. 4–6).
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flowchart LR
E["<b>E</b>"] --> Q["<b>Q</b>"]
Q --> H["<b>H</b>"]
H --> S["<b>S</b>"]
S --> D["<b>D</b>"]
D --> F["<b>F</b>"]
F --> O["<b>O</b>"]
O --> I["<b>I</b>"]
O --> C{"<b>C</b>"}
I --> C
C --> V["<b>V</b>"]
V --> F
V --> X["<b>X</b>"]
V --> K["<b>K</b>"]
X -.-> P["<b>P</b>"]
P -.-> S
X --> R["<b>R</b>"]
K --> R
R --> H
C -.-> E
O -.-> E
N["<b>N</b>"] --> O
E -.-> N
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classDef entry fill:#f6e0d4,stroke:#a1512b,stroke-width:4px,color:#5a2e17;
classDef off fill:#f3f3f1,stroke:#d3d9db,stroke-width:1px,color:#b3bcbf;
class C,D,K,O,R,S,V,X on;
class N entry;
class E,F,H,I,P,Q off;
Figure 6: Graph v0.4 as visited by Lam et al. (2023). Rust: entry node N. Teal: visited. Grey: never used (E, F, H, I, P, Q).
1NNew capability⇢2DDesign⇢3SSimulate or derive⇢4OObserve→5CCompare⇢6XExclude⇢7VVary and replicate⇢8CCompare⇢9RRefine⇢10KKeep
#
Node
Mode
What the authors did
Page
1
N New capability
Methods
Graph neural network on an icosahedral multimesh, 36.7 million parameters, trained on ERA5 1979–2017
2–3
2
D Design
Robustness
Verification designed first: 69 variable-levels; truth and initial times matched to the operational system
3
3
S Simulate or derive
Simulation
Ten-day rollouts from held-out initial states, 2018 onward
2–3
4
O Observe
Simulation
Forecasts scored against verifying analyses: RMSE and anomaly correlation
4
5
C Compare
Simulation
Better than the operational forecast on 90.3% of 1,380 targets
4
6
X Exclude
Hypothesis
Rival: the gain is only blurring. Blur the operational forecast too: still better on 88.0%
4
7
V Vary and replicate
Robustness
Regions, level exclusions, a second machine-learning baseline (99.2% of 252 targets)
4
8
C Compare
Simulation
Cyclone tracks, atmospheric rivers, and extreme heat, none trained for
5
9
R Refine
Robustness
Retrained on data ending 2017–2020, scored on 2021: more recent data helps
5
10
K Keep
Simulation
Deterministic medium-range skill retained within the stated scope
Gräff et al. (2025): a fibre along the calving front
Start. A new capability: seafloor fibre sensing “not yet used to study ice–ocean interactions” (p. 1). Enters the graph at N (New capability). (Gräff et al. 2025)
End. K, a “potential” mechanism: calving amplifies submarine melt, to be “investigated further” (p. 8).
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flowchart LR
E["<b>E</b>"] --> Q["<b>Q</b>"]
Q --> H["<b>H</b>"]
H --> S["<b>S</b>"]
S --> D["<b>D</b>"]
D --> F["<b>F</b>"]
F --> O["<b>O</b>"]
O --> I["<b>I</b>"]
O --> C{"<b>C</b>"}
I --> C
C --> V["<b>V</b>"]
V --> F
V --> X["<b>X</b>"]
V --> K["<b>K</b>"]
X -.-> P["<b>P</b>"]
P -.-> S
X --> R["<b>R</b>"]
K --> R
R --> H
C -.-> E
O -.-> E
N["<b>N</b>"] --> O
E -.-> N
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classDef entry fill:#f6e0d4,stroke:#a1512b,stroke-width:4px,color:#5a2e17;
classDef off fill:#f3f3f1,stroke:#d3d9db,stroke-width:1px,color:#b3bcbf;
class C,E,F,I,K,O,S on;
class N entry;
class D,H,P,Q,R,V,X off;
Figure 7: Graph v0.4 as visited by Gräff et al. (2025). Rust: entry node N. Teal: visited. Grey: never used (D, H, P, Q, R, V, X).
1NNew capability⇢2FFind conditions→3OObserve→4EExplore⇢5IInfer⇢6SSimulate or derive⇢7CCompare⇢8KKeep
#
Node
Mode
What the authors did
Page
1
N New capability
Instruments
A 10 km cable near the front carrying acoustic and temperature sensing; calibrated; its position inverted by MCMC
2, 10–12
2
F Find conditions
Observation
Found conditions: one glacier, 9–29 August 2023, a cable layout parallel to the front
2, 8
3
O Observe
Observation
21 days, 13 TB, alongside a radar interferometer, a camera, seismometers, 22 CTD casts, a tide gauge
2, 10
4
E Explore
Exploration
A process chain: about 56,000 detachments, several hundred tsunamis, internal waves, iceberg wakes, currents
3–7
5
I Infer
Estimation
Seafloor wave speed 230 ± 40 m/s; tsunami source 3 ± 1 km away; detection threshold about 100 m³
3–5, 12–14
6
S Simulate or derive
Theory
A three-equation melt model; internal-wave dispersion; the Turner angle
5, 12–13
7
C Compare
Synthesis
Dispersion, tsunami origin, and wave periods match the radar, CTD, and theory
4, 12–13
8
K Keep
Theory
Calving as a melt amplifier, retained as a potential mechanism
Start. Data on a new event: global records of the 2025 Mandalay earthquake, imaged to obtain “timely” rupture details (p. 476). Enters the graph at O (Observe). (Xu et al. 2025)
End. K, a conjunction of favorable conditions as best explanation for 450 km of supershear rupture (pp. 476, 480).
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flowchart LR
E["<b>E</b>"] --> Q["<b>Q</b>"]
Q --> H["<b>H</b>"]
H --> S["<b>S</b>"]
S --> D["<b>D</b>"]
D --> F["<b>F</b>"]
F --> O["<b>O</b>"]
O --> I["<b>I</b>"]
O --> C{"<b>C</b>"}
I --> C
C --> V["<b>V</b>"]
V --> F
V --> X["<b>X</b>"]
V --> K["<b>K</b>"]
X -.-> P["<b>P</b>"]
P -.-> S
X --> R["<b>R</b>"]
K --> R
R --> H
C -.-> E
O -.-> E
N["<b>N</b>"] --> O
E -.-> N
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classDef entry fill:#f6e0d4,stroke:#a1512b,stroke-width:4px,color:#5a2e17;
classDef off fill:#f3f3f1,stroke:#d3d9db,stroke-width:1px,color:#b3bcbf;
class C,E,F,H,I,K,N,P,Q,R,S,V on;
class O entry;
class D,X off;
Figure 8: Graph v0.4 as visited by Xu et al. (2025). Rust: entry node O. Teal: visited. Grey: never used (D, X).
1OObserve→2IInfer⇢3EExplore→4NNew capability⇢5VVary and replicate⇢6CCompare⇢7KKeep⇢8QQuestion→9HHypothesize⇢10FFind conditions⇢11SSimulate or derive⇢12CCompare⇢13PProtect⇢14RRefine⇢15KKeep
#
Node
Mode
What the authors did
Page
1
O Observe
Observation
Three teleseismic arrays, satellite radar, optical imagery, strong motion
476
2
I Infer
Methods
Back-projection of high-frequency radiators; joint finite-fault inversion
476–477
3
E Explore
Observation
Three arrays agree on 4.8–5.0 km/s southward, above the crustal shear speed of 2.5–3.7 km/s
476
4
N New capability
Methods
A synthetic back-projection recovers the southern speed 8–20% low
476
5
V Vary and replicate
Robustness
Nine re-inversions from different starting models
477
6
C Compare
Hypothesis
Mach waves give 3.4–5.8 km/s; fault-parallel motion and onset timing agree
477–478
7
K Keep
Observation
Southern supershear rupture retained
478
8
Q Question
Theory
Why an early transition, and why sustained?
478
9
H Hypothesize
Hypothesis
Eight transition mechanisms from the literature, listed as possible contributors
478
10
F Find conditions
Observation
Found conditions: shear speed 2.9 west against 3.3 km/s east; quiet since 1839; a smooth fault
479–480
11
S Simulate or derive
Theory
Expectations imported from published theory and laboratory work: the bimaterial direction favors supershear
479–480
12
C Compare
Theory
Direction consistent; the shorter northern branch contradicts the simulations
479
13
P Protect
Hypothesis
The northern length explained by five earlier M ≥ 6.8 earthquakes
479
14
R Refine
Theory
Poroelastic contrast, stress, and the free surface added
Loops are under-counted by design. A published paper reports the work in the order of its argument: between protocol and paper, 62% of trials changed, added, or dropped a primary outcome (Chan et al. 2004). Our coding followed the paper’s order and had no field for a failed attempt, a rerun, or a redesign, so a return and a next step look alike.
Loops are at the mode level, for coder 1. Merging consecutive repeats, the papers return to a node already visited 11 times but to a mode already used 27 times; every paper has at least one return. The decision tree draws the graph at that level.
The blind coders do not confirm it. Two blind model coders (Opus 5.5 and Sonnet 5.5, paper codebook 1.3.0, October 25, 2026) code 169 and 108 steps on the same eight papers. They find 83 and 33 node returns against 78 and 38 mode returns, so where the loops sit depends on the coder (private/analysis/reliability/codings/papers/, final-paper sequences, consecutive repeats merged).
One coder per walk, coding against the graph it tests. The coder was given the v0.4 nodes, so every step was placed on a node; “no new node needed” is partly an effect of the instruction. The blind coders also get the graph. They agree on which nodes a paper uses at Krippendorff’s alpha 0.63, below the 0.67 gate, over 13 papers (private/analysis/reliability/RESULTS.md). No person has coded yet.
Granularity varies. Vine and Matthews have 17 steps, Normandeau and colleagues and Gräff and colleagues 8. Step counts measure the coder as much as the paper.
Labels are not fully consistent. One Shapiro step is labelled replication where the others use robustness.
Supplements unread for Shapiro, Lam, Sun, and Xu, where methods and robustness checks usually sit.
Successes only, as walks. The eight walks are successes. Five matched controls have been coded since (October 21 and 25, 2026); no failure has been coded.
How to see the loops. Peer-review files, open discussions, and version histories record changes made during the work. On nine papers with such records, 126 loops were found, and 4 of them (3%) can be read as loops in the final paper (decision tree, section 6). For Gräff and colleagues and for Lam and colleagues, a review sequence can now be coded beside the final-paper sequence.
For students
Pick a paper you know. Write its start, its steps as a strip, and its end. For each step, name the node, the mode, and the page.
Mark the node where the paper entered and the nodes it never needed. Then ask what would have made it a stronger paper, and at which node.
Chan, An-Wen, Asbjørn Hróbjartsson, Mette T. Haahr, Peter C. Gøtzsche, and Douglas G. Altman. 2004. “Empirical Evidence for Selective Reporting of Outcomes in Randomized Trials.”JAMA 291 (20): 2457–65. https://doi.org/10.1001/jama.291.20.2457.
Gräff, Dominik, Bradley Paul Lipovsky, Andreas Vieli, et al. 2025. “Calving-driven fjord dynamics resolved by seafloor fibre sensing.”Nature 644 (8076): 404–12. https://doi.org/10.1038/s41586-025-09347-7.
Lam, Remi, Alvaro Sanchez-Gonzalez, Matthew Willson, et al. 2023. “Learning skillful medium-range global weather forecasting.”Science 382 (6677): 1416–21. https://doi.org/10.1126/science.adi2336.
Normandeau, Alexandre, Barret L. Kurylyk, Emma J. Harrison, et al. 2025. “Winter in the coastal ocean: Seasonal freezing causes seafloor expansion and contraction.”Science Advances 11 (44): eadw7439. https://doi.org/10.1126/sciadv.adw7439.
OECD, European Union, and Joint Research Centre - European Commission. 2008. Handbook on Constructing Composite Indicators: Methodology and User Guide. OECD Publishing. https://doi.org/10.1787/9789264043466-en.
Rodell, Matthew, Isabella Velicogna, and James S. Famiglietti. 2009. “Satellite-based estimates of groundwater depletion in India.”Nature 460 (7258): 999–1002. https://doi.org/10.1038/nature08238.
Shapiro, Nikolai M., Michel Campillo, Laurent Stehly, and Michael H. Ritzwoller. 2005. “High-Resolution Surface-Wave Tomography from Ambient Seismic Noise.”Science 307 (5715): 1615–18. https://doi.org/10.1126/science.1108339.
Sun, Tianhaozhe, and Earl E. Davis. 2026. “Strain accumulation associated with locked subduction megathrusts revealed by deep-ocean borehole observations.”Science Advances 12 (16): eaea7133. https://doi.org/10.1126/sciadv.aea7133.
Vine, F. J., and D. H. Matthews. 1963. “Magnetic Anomalies Over Oceanic Ridges.”Nature 199 (4897): 947–49. https://doi.org/10.1038/199947a0.
Xu, Liuwei, Lingsen Meng, Zhang Yunjun, et al. 2025. “Bimaterial effect and favorable energy ratio enabled supershear rupture in the 2025 Mandalay earthquake.”Science 390 (6772): 476–81. https://doi.org/10.1126/science.ady6100.